Visualization and analysis of protein interactions.

TitleVisualization and analysis of protein interactions.
Publication TypeJournal Article
Year of Publication2003
AuthorsJu, B-H, Park, B, Park, JH, Han, K
JournalBioinformatics
Volume19
Issue2
Pagination317-8
Date Published2003 Jan 22
ISSN1367-4803
KeywordsAlgorithms, Amino Acid Sequence, Computer Graphics, Database Management Systems, Databases, Protein, Imaging, Three-Dimensional, Information Storage and Retrieval, Macromolecular Substances, Models, Molecular, Molecular Sequence Data, Protein Binding, Proteins, Sequence Analysis, Protein, User-Computer Interface
Abstract

SUMMARY: We have developed a new program called InterViewer for drawing large-scale protein interaction networks in three-dimensional space. Unique features of InterViewer include (1) it is much faster than other recent implementations of drawing algorithms; (2) it can be used not only for visualizing protein interactions but also for analyzing them interactively; and (3) it provides an integrated framework for querying protein interaction databases and directly visualizes the query results.AVAILABILITY: http://wilab.inha.ac.kr/protein/

DOI10.1093/bioinformatics/19.2.317
Alternate JournalBioinformatics
Citation Key10.1093/bioinformatics/19.2.317
PubMed ID12538268